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HAMAP rule MF_03005

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General rule information [?]

Accession MF_03005
Dates 29-JAN-2009 (Created)
20-NOV-2019 (Last updated, Version 14)
Name eIF3f
Scope
Eukaryota
Templates O00303 (EIF3F_HUMAN); O43060 (EIF3F_SCHPO); Q18967 (EIF3F_CAEEL): [Recover all]
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

Identifier
EIF3F
case <OC:Mammalia>
Protein name
RecName: Full=Eukaryotic translation initiation factor 3 subunit F;
Short=eIF3f;
AltName: Full=Eukaryotic translation initiation factor 3 subunit 5;
AltName: Full=eIF-3-epsilon;
AltName: Full=eIF3 p47;
else case <OC:Fungi>
Protein name
RecName: Full=Eukaryotic translation initiation factor 3 subunit F;
Short=eIF3f;
else case <OC:Viridiplantae>
Protein name
RecName: Full=Eukaryotic translation initiation factor 3 subunit F;
Short=eIF3f;
AltName: Full=eIF-3-epsilon;
else
Protein name
RecName: Full=Eukaryotic translation initiation factor 3 subunit F;
Short=eIF3f;
AltName: Full=Eukaryotic translation initiation factor 3 subunit 5;
end case
case <OC:Vertebrata>
Gene name
EIF3F, EIF3S5
else case <OC:Caenorhabditis>
Gene name
eif-3.F
else case <OC:Drosophilidae>
Gene name
eIF3f, eIF3-S5
end case

Comments [?]

case <OC:Mammalia>
Function Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression.
else
Function Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
end case
case <OC:Mammalia>
Subunit Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is composed of 13 subunits: EIF3A, EIF3B, EIF3C, EIF3D, EIF3E, EIF3F, EIF3G, EIF3H, EIF3I, EIF3J, EIF3K, EIF3L and EIF3M. The eIF-3 complex appears to include 3 stable modules: module A is composed of EIF3A, EIF3B, EIF3G and EIF3I; module B is composed of EIF3F, EIF3H, and EIF3M; and module C is composed of EIF3C, EIF3D, EIF3E, EIF3K and EIF3L. EIF3C of module C binds EIF3B of module A and EIF3H of module B, thereby linking the three modules. EIF3J is a labile subunit that binds to the eIF-3 complex via EIF3B. The eIF-3 complex interacts with RPS6KB1 under conditions of nutrient depletion. Mitogenic stimulation leads to binding and activation of a complex composed of MTOR and RPTOR, leading to phosphorylation and release of RPS6KB1 and binding of EIF4B to eIF-3.
else case <OC:Vertebrata> and not <OC:Mammalia>
Subunit Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is composed of 13 subunits: @gn(EIF3A), @gn(EIF3B), @gn(EIF3C), @gn(EIF3D), @gn(EIF3E), @gn(EIF3F), @gn(EIF3G), @gn(EIF3H), @gn(EIF3I), @gn(EIF3J), @gn(EIF3K), @gn(EIF3L) and @gn(EIF3M).
else case <OC:Drosophilidae>
Subunit Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. The eIF-3 complex interacts with pix.
else
Subunit Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.
end case
Subcellular location Cytoplasm.
case <OC:Mammalia>
Ptm Phosphorylated. Phosphorylation is enhanced upon serum stimulation.
end case
Similarity Belongs to the eIF-3 subunit F family.

Keywords [?]

Cytoplasm
Initiation factor
Protein biosynthesis
case <FTTag:acetyl>
Acetylation
end case
case <OC:Mammalia>
Phosphoprotein
end case

Gene Ontology [?]

GO:0003743; Molecular function: translation initiation factor activity.
GO:0001732; Biological process: formation of cytoplasmic translation initiation complex.
GO:0002183; Biological process: cytoplasmic translational initiation.
GO:0005737; Cellular component: cytoplasm.
GO:0005852; Cellular component: eukaryotic translation initiation factor 3 complex.
GO:0016282; Cellular component: eukaryotic 43S preinitiation complex.
GO:0033290; Cellular component: eukaryotic 48S preinitiation complex.

Cross-references [?]

Pfam PF01398; JAB; 1;
PROSITE PS50249; MPN; 1; trigger=PRU01182;

Features [?]

case <OC:Mammalia>
From: EIF3F_HUMAN (O00303)
Key     From     To       Description   Tag   Condition   FTGroup
INIT_MET     1     1       Removed     M  
MOD_RES     2     2       N-acetylalanine   acetyl   A  
MOD_RES     258     258       Phosphoserine     S  
end case

Additional information [?]

Size range 273-375 amino acids
Related rules None
Fusion None


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