HAMAP rule MF_03015
General rule information
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Accession | MF_03015 |
Dates | 26-OCT-2009 (Created) 1-JUN-2023 (Last updated, Version 10) |
Name | Ribosomal_S2_euk |
Scope | Eukaryota; except Vertebrata
|
Templates | P08865 (RSSA_HUMAN); P32905 (RSSA1_YEAST); P14206 (RSSA_MOUSE); P46769 (RSSA_CAEEL); Q3ZM03 (RSSA_XENLA); P38982 (RSSA_CRIGR); Q9Y7L8 (RSSA1_SCHPO): [Recover all] |
Triggered by |
Propagated annotation
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Identifier, protein and gene names
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Identifier |
|
case <OC:Drosophilidae>
Protein name |
|
else
Protein name |
|
end case
case <OC:Caenorhabditis>
Gene name |
|
else case <OC:Drosophilidae>
Gene name |
|
else case <OC:Fungi>
Gene name |
|
end case
Comments
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case <OC:Drosophilidae>
Function | Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Required during oogenesis and imaginal development. |
else
Function | Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. |
end case
case <OC:Caenorhabditis>
Subunit | Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (28S, 5.8S and 5S). Interacts with rps-21. |
else case <OC:Drosophilidae>
Subunit | Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (28S, 5.8S and 5S). Interacts with oho23B/rpS21. |
else case <OC:Metazoa> and not <OC:Vertebrata> and not <OC:Caenorhabditis> and not <OC:Drosophilidae>
Subunit | Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (28S, 5.8S and 5S). Interacts with ribosomal protein S21. |
else case <OC:Fungi>
Subunit | Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with @gn(RPS21). |
else
Subunit | Component of the small ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit. The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S). The 60S subunit contains about 49 different proteins and 3 molecules of RNA (25S, 5.8S and 5S). Interacts with ribosomal protein S21. |
end case
case <OC:Drosophilidae>
Subcellular location | Cytoplasm. Nucleus. Note=May associate with nascent RNP complexes within the nucleus. |
else
Subcellular location | Cytoplasm. |
end case
Similarity | Belongs to the universal ribosomal protein uS2 family. |
Keywords
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case <FTTag:acetyl>
end case
case <OC:Drosophilidae>
end case
case <OC:Drosophilidae>
end case
Gene Ontology
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GO:0022627; Cellular component: cytosolic small ribosomal subunit.
GO:0003735; Molecular function: structural constituent of ribosome.
GO:0000028; Biological process: ribosomal small subunit assembly.
GO:0006412; Biological process: translation.
GO:0003735; Molecular function: structural constituent of ribosome.
GO:0000028; Biological process: ribosomal small subunit assembly.
GO:0006412; Biological process: translation.
Cross-references
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PROSITE | PS00962; RIBOSOMAL_S2_1; 1; |
PS00963; RIBOSOMAL_S2_2; 1; | |
Pfam | PF00318; Ribosomal_S2; 1; |
PRINTS | PR00395; RIBOSOMALS2; 1; |
NCBIfam | TIGR01012; Sa_S2_E_A; 1; |
Features
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case <OC:Caenorhabditis>
From: RSSA_CAEEL (P46769) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
INIT_MET | 1 | 1 | Removed | M | ||||||||
MOD_RES | 2 | 2 | N-acetylserine | acetyl | S |
end case
case <OC:Saccharomycetes>
From: RSSA1_YEAST (P32905) | ||||||||||||
INIT_MET | 1 | 1 | Removed | M | ||||||||
MOD_RES | 2 | 2 | N-acetylserine | acetyl | S |
end case
Additional information
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Size range | 240-325 amino acids |
Related rules | MF_03016 (RSSA supersedes the current rule) |
Fusion | None |