HAMAP rule MF_03055
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_03055 |
| Accession | MF_03055 |
| Dates | 21-AUG-2013 (Created)
23-MAY-2024 (Last updated, Version 14) |
| Name | tRNA_methyltr_TrmB_euk |
| Scope(s) |
Eukaryota |
| Template(s) | Q9UBP6; Q12009; [ Recover all ] |
| Triggered by |
HAMAP; MF_03055 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | TRMB |
| Protein name | RecName: Full=tRNA (guanine-N(7)-)-methyltransferase; EC=2.1.1.33; AltName: Full=tRNA (guanine(46)-N(7))-methyltransferase; AltName: Full=tRNA(m7G46)-methyltransferase; |
| case <OC:Vertebrata> | |
| Protein name | + AltName: Full=Methyltransferase-like protein 1; |
| else case <OC:Fungi> | |
| Protein name | + AltName: Full=Transfer RNA methyltransferase 8; |
| end case | |
| case <OC:Vertebrata> or <OC:Dictyostelium> | |
| Gene name | Name=METTL1; |
| else case <OC:Caenorhabditis> | |
| Gene name | Name=metl-1; |
| else case <OC:Fungi> | |
| Gene name | Name=TRM8; |
| end case | |
Comments
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| case <OC:Saccharomyces> | |
| FUNCTION | Methyltransferase that catalyzes the formation of N(7)- methylguanine at position 46 (m7G46) in tRNA, a modification required to maintain stability of tRNAs; its absence resulting in tRNA decay. Both the D-stem and T-stem structures of tRNAs are required for efficient methyltransferase activity. |
| else | |
| FUNCTION | Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. |
| end case | |
| CATALYTIC ACTIVITY | Reaction=guanosine(46) in tRNA + S-adenosyl-L-methionine = N(7)- methylguanosine(46) in tRNA + S-adenosyl-L-homocysteine; Xref=Rhea:RHEA:42708, Rhea:RHEA-COMP:10188, Rhea:RHEA-COMP:10189, ChEBI:CHEBI:57856, ChEBI:CHEBI:59789, ChEBI:CHEBI:74269, ChEBI:CHEBI:74480; EC=2.1.1.33; |
| PATHWAY | tRNA modification; N(7)-methylguanine-tRNA biosynthesis. |
| case <OC:Vertebrata> | |
| SUBUNIT | Forms a complex with @gn(WDR4). |
| else case <OC:Fungi> | |
| SUBUNIT | Forms a complex with @gn(TRM82). |
| end case | |
| SUBCELLULAR LOCATION | Nucleus. |
| case <FTTag:phospho> | |
| PTM | Phosphorylation at #{Ser-27} inactivates its catalytic activity but does not affect the interaction with @gn(WDR4). |
| end case | |
| SIMILARITY | Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. |
Keywords
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| Methyltransferase | |
| Nucleus | |
| RNA-binding | |
| S-adenosyl-L-methionine | |
| Transferase | |
| tRNA processing | |
| tRNA-binding | |
| case <FTTag:phospho> | |
| Phosphoprotein | |
| end case | |
Gene Ontology
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| GO:0000049; Molecular function:tRNA binding |
| GO:0008176; Molecular function:tRNA (guanine(46)-N7)-methyltransferase activity |
| GO:0005634; Cellular component:nucleus |
| GO:0106004; Biological process:tRNA (guanine-N7)-methylation |
Cross-references
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Features
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| From: TRMB_HUMAN (Q9UBP6) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 107 | 108 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
E-[IL] | ||||||||
| BINDING | 140 | 141 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
N-x | ||||||||
| BINDING | 238 | 240 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
[ST]-[ED]-[ED] | ||||||||
| ACT_SITE | 163 | 163 | D | |||||||||
| BINDING | 84 | 84 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
G | ||||||||
| BINDING | 160 | 160 | /ligand="S-adenosyl-L-methionine" /ligand_id="ChEBI:CHEBI:59789" |
[LC] | ||||||||
| case <OC:Mammalia> | ||||||||||||
| MOD_RES | 27 | 27 | /note="Phosphoserine; by PKB and RPS6KA3" | phospho | S | |||||||
| end case | ||||||||||||
Additional information
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| Size range | 214-377 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |