HAMAP rule MF_00480
General rule information
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| Accession | MF_00480 |
| Dates | 3-NOV-2001 (Created)
21-SEP-2023 (Last updated, Version 38) |
| Name | Ribosomal_uS7 |
| Scope(s) |
Bacteria Archaea Plastid |
| Template(s) | P22744 (RS7_GEOSE); P02359 (RS7_ECOLI); P17291 (RS7_THET8); O59230 (RS7_PYRHO); [ Recover all ] |
| Triggered by |
case c? <OC:Bacteria> or <OG:Chloroplast>
HAMAP; MF_00480_B (Get profile general information and statistics) end case
case c? <OC:Archaea>
HAMAP; MF_00480_A (Get profile general information and statistics) end case
|
Propagated annotation
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Identifier, protein and gene names
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| case <OC:Bacteria> and not <OC:Cyanobacteriota> | |
| Identifier | RS7 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS7; |
| Gene name | Name=rpsG; |
| end case | |
| case <OC:Cyanobacteriota> | |
| Identifier | RS7 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS7; |
| Gene name | Name=rpsG; Synonyms=rps7; |
| end case | |
| case <OC:Archaea> | |
| Identifier | RS7 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS7; |
| Gene name | Name=rps7; |
| end case | |
| case <OG:Chloroplast> | |
| Identifier | RR7 |
| Protein name | RecName: Full=Small ribosomal subunit protein uS7c; |
| Gene name | Name=rps7; |
| end case | |
Comments
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| case <OC:Bacteria> | |
| FUNCTION | One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA. |
| SUBUNIT | Part of the 30S ribosomal subunit. Contacts proteins S9 and S11. |
| end case | |
| case <OC:Archaea> | |
| FUNCTION | One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center. |
| SUBUNIT | Part of the 30S ribosomal subunit. |
| end case | |
| case <OG:Chloroplast> | |
| FUNCTION | One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. |
| SUBUNIT | Part of the 30S ribosomal subunit. |
| SUBCELLULAR LOCATION | Plastid, chloroplast. |
| end case | |
| SIMILARITY | Belongs to the universal ribosomal protein uS7 family. |
Keywords
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| Ribonucleoprotein | |
| Ribosomal protein | |
| RNA-binding | |
| rRNA-binding | |
| case not <OG:Chloroplast> and not <OC:Archaea> | |
| tRNA-binding | |
| end case | |
Gene Ontology
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| GO:0019843; Molecular function:rRNA binding | |
| case not <OG:Chloroplast> and not <OCellular component:Archaea> | |
| GO:0000049; Molecular function:tRNA binding | |
| end case | |
| GO:0006412; Biological process:translation | |
| case <OG:Chloroplast> | |
| GO:0009507; Cellular component:chloroplast | |
| end case | |
Cross-references
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| Pfam | PF00177; Ribosomal_S7; 1; |
| NCBIfam | TIGR01028; S7_S5_E_A; 1; |
| NCBIfam | TIGR01029; RpsG_bact; 1; |
| PROSITE | PS00052; RIBOSOMAL_S7; 1; |
Features
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Additional information
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| Size range | 184-227 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |