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HAMAP rule MF_01371

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General rule information [?]

Accession MF_01371
Dates 8-JAN-2007 (Created)
22-SEP-2023 (Last updated, Version 20)
Name Ribosomal_uL30
Scope(s) Bacteria
Acidobacteriota
Actinomycetota
Aquificae
Bacteroidota
Chlorobiota
Chloroflexota
Deinococcota
Bacillota
Fusobacteriota
Pseudomonadota
Spirochaetota
Thermotogae
Archaea
Template(s) Q9RSL0 (RL30_DEIRA); P0AG51 (RL30_ECOLI); Q5SHQ6 (RL30_THET8); P14121 (RL30_HALMA); [ Recover all ]
Triggered by
case c? <OC:Bacteria>
HAMAP; MF_01371_B (Get profile general information and statistics)
end case
case c? <OC:Archaea>
HAMAP; MF_01371_A (Get profile general information and statistics)
end case

Propagated annotation [?]

Identifier, protein and gene names [?]

Identifier RL30
case <OC:Bacteria>
Protein name RecName: Full=Large ribosomal subunit protein uL30;
Gene name Name=rpmD;
else case <OC:Archaea>
Protein name RecName: Full=Large ribosomal subunit protein uL30;
Gene name Name=rpl30;
end case

Comments [?]

SUBUNITPart of the 50S ribosomal subunit.
SIMILARITYBelongs to the universal ribosomal protein uL30 family.

Keywords [?]


Gene Ontology [?]

GO:0006412; Biological process:translation

Cross-references [?]

PROSITE PS00634; RIBOSOMAL_L30; 1;
Pfam PF00327; Ribosomal_L30; 1;
NCBIfam TIGR01308; RpmD_bact; 1;
NCBIfam TIGR01309; L30P_arch; 1;

Features [?]


Additional information [?]

Size range 149-185 amino acids
Related rules None
Fusion Nter: None Cter: <Unknown>
Comments Fused with an unknown region in AQUAE. N-terminal extension in RUTMC not taken into account for size range. CENSY, METS5 and NITMS considered atypical. Missing from spinach chloroplast ribosomes, and from Chlamydiota, Cyanobacteriota and Planctomycetes.



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