HAMAP rule MF_00476
General rule information
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Accession | MF_00476 |
Dates | 26-OCT-2001 (Created)
1-JUN-2023 (Last updated, Version 37) |
Name | NikR |
Scope(s) |
Bacteria Archaea |
Template(s) | P0A6Z6 (NIKR_ECOLI); [ Recover all ] |
Triggered by |
HAMAP; MF_00476 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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Identifier | NIKR |
case <OC:Enterobacterales> | |
Protein name | RecName: Full=Nickel-responsive regulator; |
Gene name | Name=nikR; |
else | |
Protein name | RecName: Full=Putative nickel-responsive regulator; |
end case |
Comments
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case <OC:Enterobacterales> | |
FUNCTION | Transcriptional repressor of the nikABCDE operon. Is active in the presence of excessive concentrations of intracellular nickel. |
else | |
FUNCTION | Transcriptional regulator. |
end case | |
case <FTGroup:1> | |
COFACTOR | Name=Ni(2+); Xref=ChEBI:CHEBI:49786; Note=Binds 1 nickel ion per subunit.; |
end case | |
case <OC:Enterobacterales> | |
SUBUNIT | Homotetramer. |
end case | |
SIMILARITY | Belongs to the transcriptional regulatory CopG/NikR family. |
Keywords
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case <OC:Enterobacterales> | |
Repressor | |
end case | |
Transcription | |
Transcription regulation | |
DNA-binding | |
case <FTGroup:1> | |
Nickel | |
Metal-binding | |
end case |
Gene Ontology
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GO:0016151; Molecular function:nickel cation binding |
GO:0003700; Molecular function:DNA-binding transcription factor activity |
GO:0006355; Biological process:regulation of DNA-templated transcription |
Cross-references
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Features
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From: NIKR_ECOLI (P0A6Z6) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
BINDING | 76 | 76 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
H | 1 | |||||||
BINDING | 87 | 87 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
H | 1 | |||||||
BINDING | 89 | 89 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
H | 1 | |||||||
BINDING | 95 | 95 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
C | 1 |
Additional information
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Size range | 127-148 amino acids |
Related rules |
None |
Fusion | Nter: None Cter: None |