HAMAP rule MF_00476
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_00476 |
| Accession | MF_00476 |
| Dates | 28-FEB-2005 (Created)
01-JUN-2023 (Last updated, Version 27) |
| Name | NikR |
| Scope(s) |
Bacteria Archaea |
| Template(s) | P0A6Z6; [ Recover all ] |
| Triggered by |
HAMAP; MF_00476 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | NIKR |
| case <OC:Enterobacterales> | |
| Protein name | RecName: Full=Nickel-responsive regulator; |
| Gene name | Name=nikR; |
| else | |
| Protein name | RecName: Full=Putative nickel-responsive regulator; |
| end case | |
Comments
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| case <OC:Enterobacterales> | |
| FUNCTION | Transcriptional repressor of the nikABCDE operon. Is active in the presence of excessive concentrations of intracellular nickel. |
| else | |
| FUNCTION | Transcriptional regulator. |
| end case | |
| case <FTGroup:1> | |
| COFACTOR | Name=Ni(2+); Xref=ChEBI:CHEBI:49786; Note=Binds 1 nickel ion per subunit.; |
| end case | |
| case <OC:Enterobacterales> | |
| SUBUNIT | Homotetramer. |
| end case | |
| SIMILARITY | Belongs to the transcriptional regulatory CopG/NikR family. |
Keywords
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| case <OC:Enterobacterales> | |
| Repressor | |
| end case | |
| Transcription | |
| Transcription regulation | |
| DNA-binding | |
| case <FTGroup:1> | |
| Nickel | |
| Metal-binding | |
| end case | |
Gene Ontology
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| GO:0016151; Molecular function:nickel cation binding |
| GO:0003700; Molecular function:DNA-binding transcription factor activity |
| GO:0006355; Biological process:regulation of DNA-templated transcription |
Cross-references
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Features
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| From: NIKR_ECOLI (P0A6Z6) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| BINDING | 76 | 76 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
H | 1 | |||||||
| BINDING | 87 | 87 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
H | 1 | |||||||
| BINDING | 89 | 89 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
H | 1 | |||||||
| BINDING | 95 | 95 | /ligand="Ni(2+)" /ligand_id="ChEBI:CHEBI:49786" |
C | 1 | |||||||
Additional information
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| Size range | 127-148 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |