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Annotation rule MF_01082
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General rule information [?]

Accession MF_01082
Dates 26-SEP-2003 (Created)
19-NOV-2019 (Last updated, Version 27)
Name TruD
Scope
Bacteria
Archaea
Template Q57261 (TRUD_ECOLI)
Triggered by

Propagated annotation [?]


Identifier, protein and gene names [?]

Identifier
TRUD
case <OC:Bacteria>
Protein name
RecName: Full=tRNA pseudouridine synthase D;
EC 5.4.99.27;
AltName: Full=tRNA pseudouridine(13) synthase;
AltName: Full=tRNA pseudouridylate synthase D;
AltName: Full=tRNA-uridine isomerase D;
end case
case <OC:Archaea>
Protein name
RecName: Full=Probable tRNA pseudouridine synthase D;
EC 5.4.99.27;
AltName: Full=tRNA pseudouridine(13) synthase;
AltName: Full=tRNA pseudouridylate synthase D;
AltName: Full=tRNA-uridine isomerase D;
end case
Gene name
truD

Comments [?]

case <OC:Bacteria>
Function Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
end case
case <OC:Archaea>
Function Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs.
end case
Catalytic activity RHEA:42540: uridine(13) in tRNA = pseudouridine(13) in tRNA
EC 5.4.99.27
Similarity Belongs to the pseudouridine synthase TruD family.

Keywords [?]

Isomerase
tRNA processing

Gene Ontology [?]

GO:0009982; Molecular function: pseudouridine synthase activity.
GO:0031119; Biological process: tRNA pseudouridine synthesis.

Cross-references [?]

Pfam PF01142; TruD; 1;
TIGRFAMs TIGR00094; TRNA_TruD_broad; 1;
PROSITE PS50984; TRUD; 1; trigger=PRU00342;
PS01268; UPF0024; 1;

Features [?]

From: TRUD_ECOLI (Q57261)
Key     From     To       Description   Tag   Condition   FTGroup
ACT_SITE     80     80       Nucleophile     D  
case <OC:Enterobacterales>
BINDING     27     27       Substrate     F  
BINDING     129     129       Substrate     N  
BINDING     329     329       Substrate     F  
end case

Additional information [?]

Size range 335-460 amino acids
Related rules None
Fusion None


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