HAMAP rule MF_02058
General rule information
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| PURL | https://purl.expasy.org/hamap/rule/MF_02058 |
| Accession | MF_02058 |
| Dates | 11-MAR-2016 (Created)
03-SEP-2024 (Last updated, Version 10) |
| Name | Choline_CutC |
| Scope(s) |
Bacteria Coriobacteriales Bacillota Pseudomonadota |
| Template(s) | Q30W70; [ Recover all ] |
| Triggered by |
HAMAP; MF_02058 (Get profile general information and statistics) |
Propagated annotation
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Identifier, protein and gene names
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| Identifier | CUTC |
| Protein name | RecName: Full=Choline trimethylamine-lyase; Short=Choline TMA-lyase; EC=4.3.99.4; AltName: Full=Choline utilization protein C; |
| Gene name | Name=cutC; |
Comments
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| FUNCTION | Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. |
| CATALYTIC ACTIVITY | Reaction=choline = trimethylamine + acetaldehyde; Xref=Rhea:RHEA:35095, ChEBI:CHEBI:15343, ChEBI:CHEBI:15354, ChEBI:CHEBI:58389; EC=4.3.99.4; |
| PATHWAY | Amine and polyamine metabolism; choline degradation. |
| PTM | Requires the activating protein CutD to generate the key active site glycyl radical on #{Gly-821} that is involved in catalysis. |
| SIMILARITY | Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. |
Keywords
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Gene Ontology
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| GO:0016840; Molecular function:carbon-nitrogen lyase activity |
| GO:0042426; Biological process:choline catabolic process |
Cross-references
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| PROSITE | PS00850; GLY_RADICAL_1; 1; |
| PROSITE | PS51149; GLY_RADICAL_2; 1; |
| PROSITE | PS51554; PFL; 1; |
| Pfam | PF01228; Gly_radical; 1; |
| Pfam | PF02901; PFL-like; 1; |
| NCBIfam | TIGR04394; choline_CutC; 1; |
Features
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| From: CUTC_OLEA2 (Q30W70) | ||||||||||||
| Key | From | To | Description | Tag | Condition | FTGroup | ||||||
| ACT_SITE | 489 | 489 | /note="Cysteine radical intermediate" | C | ||||||||
| ACT_SITE | 491 | 491 | /note="Proton acceptor" | E | ||||||||
| MOD_RES | 821 | 821 | /note="Glycine radical" | G | ||||||||
Additional information
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| Size range | 785-1200 amino acids |
| Related rules |
None |
| Fusion | Nter: None Cter: None |