HAMAP rule MF_03004
General rule information
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Accession | MF_03004 |
Dates | 4-FEB-2009 (Created) 20-NOV-2019 (Last updated, Version 18) |
Name | eIF3e |
Scope | Eukaryota |
Templates | P60228 (EIF3E_HUMAN); P60229 (EIF3E_MOUSE); O94513 (EIF3E_SCHPO); Q6DRI1 (EI3EA_DANRE): [Recover all] |
Triggered by |
Propagated annotation
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Identifier, protein and gene names
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Identifier |
|
case <OC:Mammalia>
Protein name |
|
else case <OC:Fungi>
Protein name |
|
else
Protein name |
|
end case
case <OC:Mammalia>
Gene name |
|
else case <OC:Vertebrata> and not <OC:Mammalia>
Gene name |
|
else case <OC:Caenorhabditis>
Gene name |
|
else case <OC:Drosophilidae>
Gene name |
|
else case <OC:Fungi>
Gene name |
|
end case
Comments
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case <OC:Mammalia>
Function | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression. Required for nonsense-mediated mRNA decay (NMD); may act in conjunction with UPF2 to divert mRNAs from translation to the NMD pathway. May interact with MCM7 and EPAS1 and regulate the proteasome-mediated degradation of these proteins. |
else
Function | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. |
end case
case <OC:Mammalia>
Subunit | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is composed of 13 subunits: EIF3A, EIF3B, EIF3C, EIF3D, EIF3E, EIF3F, EIF3G, EIF3H, EIF3I, EIF3J, EIF3K, EIF3L and EIF3M. The eIF-3 complex appears to include 3 stable modules: module A is composed of EIF3A, EIF3B, EIF3G and EIF3I; module B is composed of EIF3F, EIF3H, and EIF3M; and module C is composed of EIF3C, EIF3D, EIF3E, EIF3K and EIF3L. EIF3C of module C binds EIF3B of module A and EIF3H of module B, thereby linking the three modules. EIF3J is a labile subunit that binds to the eIF-3 complex via EIF3B. The eIF-3 complex interacts with RPS6KB1 under conditions of nutrient depletion. Mitogenic stimulation leads to binding and activation of a complex composed of MTOR and RPTOR, leading to phosphorylation and release of RPS6KB1 and binding of EIF4B to eIF-3. Interacts with COPS3, COPS6, COPS7 (COPS7A or COPS7B), EIF4G1, EPAS1, MCM7, NCBP1, PSMC6, TRIM27 and UPF2. |
else case <OC:Vertebrata> and not <OC:Mammalia>
Subunit | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is composed of 13 subunits: @gn(EIF3A), @gn(EIF3B), @gn(EIF3C), @gn(EIF3D), @gn(EIF3E), @gn(EIF3F), @gn(EIF3G), @gn(EIF3H), @gn(EIF3I), @gn(EIF3J), @gn(EIF3K), @gn(EIF3L) and @gn(EIF3M). |
else case <OC:Drosophilidae>
Subunit | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. The eIF-3 complex interacts with pix. |
else
Subunit | Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. |
end case
case <OC:Mammalia>
Subcellular location | Cytoplasm. Nucleus. Nucleus, PML body. |
else case <OC:Vertebrata> and not <OC:Mammalia>
Subcellular location | Cytoplasm. Nucleus. |
else
Subcellular location | Cytoplasm. |
end case
case <OC:Mammalia>
Ptm | Phosphorylated upon DNA damage, probably by ATM or ATR. |
end case
Similarity | Belongs to the eIF-3 subunit E family. |
Keywords
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case <FTTag:acetyl>
end case
case <OC:Vertebrata>
end case
case <OC:Mammalia>
end case
Gene Ontology
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GO:0003743; Molecular function: translation initiation factor activity.
GO:0001732; Biological process: formation of cytoplasmic translation initiation complex.
GO:0002183; Biological process: cytoplasmic translational initiation.
GO:0005737; Cellular component: cytoplasm.
GO:0001732; Biological process: formation of cytoplasmic translation initiation complex.
GO:0002183; Biological process: cytoplasmic translational initiation.
GO:0005737; Cellular component: cytoplasm.
case <OC:Vertebrata>
GO:0005634; Cellular component: nucleus.
end case
GO:0071540; Cellular component: eukaryotic translation initiation factor 3 complex, eIF3e.
GO:0016282; Cellular component: eukaryotic 43S preinitiation complex.
GO:0033290; Cellular component: eukaryotic 48S preinitiation complex.
GO:0016282; Cellular component: eukaryotic 43S preinitiation complex.
GO:0033290; Cellular component: eukaryotic 48S preinitiation complex.
Cross-references
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Features
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case <OC:Mammalia>
From: EIF3E_HUMAN (P60228) | ||||||||||||
Key | From | To | Description | Tag | Condition | FTGroup | ||||||
INIT_MET | 1 | 1 | Removed | M | ||||||||
REGION | 4 | 128 | Sufficient for interaction with EPAS1 | |||||||||
REGION | 9 | 195 | Sufficient for interaction with TRIM27 | |||||||||
REGION | 351 | 445 | Sufficient for interaction with MCM7 | |||||||||
MOD_RES | 2 | 2 | N-acetylalanine | acetyl | A |
end case
Additional information
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Size range | 357-601 amino acids |
Related rules | None |
Fusion | None |